1.1

1.1.0

Version 1.1.0 is the second release of the Categorical Variant Representation Specification. Since 1.0.0, we have introduced two new data classes, enhanced our documentation and repository tooling, and published a preprint on the specification.

News

• The Categorical Variant Representation Specification manuscript has been submitted. Please cite our preprint.

Minor changes

The following product features at trial use maturity were modified:

• Defining Allele Constraint relations property is a Mappable Concept, and now requires the type field (#246)

• Defining Location Constraint relations and matchCharacteristic properties are Mappable Concepts, and now require the type field (#246)

Patch changes

The following product features at draft maturity were introduced:

• Adjacency Constraint and Gene Fusion Recipe (#178)

• Function Constraint and Function Variant Recipe (#164)

The following supporting changes were made to Cat-VRS that do not impact Cat-VRS schemas:

• Documentation updates:

  • Each concept now has their own page (#195)

  • Examples now have their own page (#223, #229)

  • GKS Think Tank now included on Getting Involved page (#210)

  • Highlight Read the Docs versions within documentation (#213, #214)

  • Implementation guidance was written for all concepts (#158, #232)

  • Updated Quick Start (#219)

  • Updated Read the Docs display (#183, #185, #192, #227)

  • Updated Roadmap (#225)

• Editorial changes to documentation:

  • Typo fixes (#153, #160)

  • Revisions to data class descriptions (#175, #180, #209)

• Testing enhancements:

  • Added all examples to test suite (#155)

  • Resolved many Read the Docs build warnings (#182)

• Various updates to help manage the specification’s GitHub repository:

  • Added README badges (#204 #244, #245)

  • Added repository templates (#156, #200, #237)

  • Adjust CODEOWNERS file (#163)

  • Removed duplicate requirements.txt file (#198)